STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC05g14070DBnaC05g14070D protein. (362 aa)    
Predicted Functional Partners:
BnaA02g17000D
BnaA02g17000D protein.
  
   
 0.527
BnaA07g31770D
BnaA07g31770D protein.
  
   
 0.508
BnaCnng64190D
BnaCnng64190D protein.
    
 
 0.486
BnaCnng78680D
BnaCnng78680D protein.
  
   
 0.480
BnaCnng37560D
BnaCnng37560D protein.
     
 0.472
BnaCnng43250D
BnaCnng43250D protein.
     
 0.472
BnaC03g64500D
BnaC03g64500D protein.
      
 0.467
BnaC09g36400D
BnaC09g36400D protein.
      
 0.465
BnaC02g09600D
BnaC02g09600D protein.
      
 0.465
BnaAnng39080D
BnaAnng39080D protein.
      
 0.465
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.