STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA04g18920DBnaA04g18920D protein. (645 aa)    
Predicted Functional Partners:
BnaA09g11740D
BnaA09g11740D protein.
    
 0.662
BnaC04g12970D
BnaC04g12970D protein.
    
 0.657
BnaA04g11170D
BnaA04g11170D protein.
    
 0.657
BnaC06g23920D
BnaC06g23920D protein.
      
 0.645
BnaA04g11180D
BnaA04g11180D protein.
      
 0.645
BnaA01g32130D
BnaA01g32130D protein.
      
 0.645
BnaC02g46990D
BnaC02g46990D protein.
      
 0.645
BnaA09g47300D
BnaA09g47300D protein; Belongs to the disease resistance NB-LRR family.
      
 0.579
BnaC06g09930D
BnaC06g09930D protein.
  
 
  0.518
BnaA02g28080D
BnaA02g28080D protein.
  
     0.513
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.