STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA02g08850DBnaA02g08850D protein. (81 aa)    
Predicted Functional Partners:
BnaCnng50960D
BnaCnng50960D protein.
  
     0.521
BnaA08g12040D
BnaA08g12040D protein.
  
     0.510
BnaA10g16810D
BnaA10g16810D protein.
  
     0.508
BnaC03g66930D
BnaC03g66930D protein.
  
     0.507
BnaUnng04580D
BnaUnng04580D protein.
  
     0.507
BnaC03g27390D
BnaC03g27390D protein.
  
     0.506
BnaA06g37320D
BnaA06g37320D protein.
  
     0.505
BnaA01g13840D
Methyltransferase.
  
     0.504
BnaA08g20090D
BnaA08g20090D protein.
  
     0.503
BnaC06g18280D
BnaC06g18280D protein.
  
     0.499
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.