STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC01g31680DBnaC01g31680D protein. (126 aa)    
Predicted Functional Partners:
BnaCnng13440D
BnaCnng13440D protein.
  
   0.546
BnaCnng25830D
BnaCnng25830D protein.
  
     0.543
BnaCnng03250D
BnaCnng03250D protein.
  
     0.542
BnaC02g23960D
BnaC02g23960D protein.
  
     0.541
BnaC01g30390D
BnaC01g30390D protein.
  
     0.541
BnaC05g51610D
BnaC05g51610D protein.
  
     0.541
BnaCnng40560D
BnaCnng40560D protein.
  
     0.541
BnaA09g40080D
BnaA09g40080D protein.
  
     0.540
BnaC09g17360D
BnaC09g17360D protein.
  
     0.540
BnaC03g76090D
BnaC03g76090D protein.
  
     0.540
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.