Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BnaA01g34120D | BnaA01g34180D | A0A078G6X0 | A0A078G836 | BnaA01g34120D protein; Belongs to the universal ribosomal protein uS3 family. | BnaA01g34180D protein; Belongs to the ATPase B chain family. | 0.949 |
BnaA01g34120D | BnaA01g34230D | A0A078G6X0 | A0A078G842 | BnaA01g34120D protein; Belongs to the universal ribosomal protein uS3 family. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.844 |
BnaA01g34120D | BnaC04g48350D | A0A078G6X0 | A0A078FR89 | BnaA01g34120D protein; Belongs to the universal ribosomal protein uS3 family. | BnaA01g34270D protein. | 0.510 |
BnaA01g34120D | BnaC06g14700D | A0A078G6X0 | A0A078F3M2 | BnaA01g34120D protein; Belongs to the universal ribosomal protein uS3 family. | BnaC06g14700D protein. | 0.971 |
BnaA01g34120D | BnaC09g29130D | A0A078G6X0 | A0A078G3S7 | BnaA01g34120D protein; Belongs to the universal ribosomal protein uS3 family. | BnaC09g29130D protein. | 0.880 |
BnaA01g34120D | rpoA | A0A078G6X0 | D1L8S0 | BnaA01g34120D protein; Belongs to the universal ribosomal protein uS3 family. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.997 |
BnaA01g34120D | rpoC2 | A0A078G6X0 | D1L8M8 | BnaA01g34120D protein; Belongs to the universal ribosomal protein uS3 family. | RNA polymerase beta'' subunit. | 0.854 |
BnaA01g34180D | BnaA01g34120D | A0A078G836 | A0A078G6X0 | BnaA01g34180D protein; Belongs to the ATPase B chain family. | BnaA01g34120D protein; Belongs to the universal ribosomal protein uS3 family. | 0.949 |
BnaA01g34180D | BnaA01g34230D | A0A078G836 | A0A078G842 | BnaA01g34180D protein; Belongs to the ATPase B chain family. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.962 |
BnaA01g34180D | BnaC04g48350D | A0A078G836 | A0A078FR89 | BnaA01g34180D protein; Belongs to the ATPase B chain family. | BnaA01g34270D protein. | 0.896 |
BnaA01g34180D | BnaC06g14700D | A0A078G836 | A0A078F3M2 | BnaA01g34180D protein; Belongs to the ATPase B chain family. | BnaC06g14700D protein. | 0.974 |
BnaA01g34180D | BnaC09g29130D | A0A078G836 | A0A078G3S7 | BnaA01g34180D protein; Belongs to the ATPase B chain family. | BnaC09g29130D protein. | 0.846 |
BnaA01g34180D | BnaC09g29330D | A0A078G836 | A0A078G3U4 | BnaA01g34180D protein; Belongs to the ATPase B chain family. | BnaC09g29330D protein; Probable ATPase of unknown function. Its presence in a non- photosynthetic plant (Epifagus virginiana) and experiments in tobacco indicate that it has an essential function which is probably not related to photosynthesis; Belongs to the Ycf2 family. | 0.863 |
BnaA01g34180D | rpoA | A0A078G836 | D1L8S0 | BnaA01g34180D protein; Belongs to the ATPase B chain family. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.972 |
BnaA01g34180D | rpoC2 | A0A078G836 | D1L8M8 | BnaA01g34180D protein; Belongs to the ATPase B chain family. | RNA polymerase beta'' subunit. | 0.950 |
BnaA01g34230D | BnaA01g34120D | A0A078G842 | A0A078G6X0 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | BnaA01g34120D protein; Belongs to the universal ribosomal protein uS3 family. | 0.844 |
BnaA01g34230D | BnaA01g34180D | A0A078G842 | A0A078G836 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | BnaA01g34180D protein; Belongs to the ATPase B chain family. | 0.962 |
BnaA01g34230D | BnaA09g08150D | A0A078G842 | A0A078FW02 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | BnaA09g08150D protein. | 0.567 |
BnaA01g34230D | BnaC04g48350D | A0A078G842 | A0A078FR89 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | BnaA01g34270D protein. | 0.847 |
BnaA01g34230D | BnaC06g14700D | A0A078G842 | A0A078F3M2 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | BnaC06g14700D protein. | 0.888 |
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