STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC04g05800DBnaC04g05800D protein. (188 aa)    
Predicted Functional Partners:
BnaA07g04030D
BnaA07g04030D protein.
    
 0.990
BnaC06g14380D
BnaC06g14380D protein.
    
 
 0.927
BnaCnng05470D
BnaCnng05470D protein.
    
 
 0.923
BnaC06g40330D
BnaC06g40330D protein.
   
 0.923
BnaC02g46520D
BnaA02g19480D protein.
   
 0.923
BnaAnng40710D
BnaAnng40710D protein.
   
 0.923
BnaC04g47780D
Nuclear pore protein.
   
 0.915
BnaA08g19040D
BnaA08g19040D protein.
   
 0.912
BnaC03g75780D
BnaC03g75780D protein.
   
 0.912
BnaA09g45410D
BnaA09g45410D protein.
   
 0.910
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.