STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA09g03080DBnaA09g03080D protein. (211 aa)    
Predicted Functional Partners:
BnaA09g03810D
BnaA09g03810D protein; Belongs to the cyclin family.
   
 0.699
BnaC06g27720D
BnaC06g27720D protein; Belongs to the protein kinase superfamily.
    
 0.670
BnaA09g44730D
BnaA09g44730D protein; Belongs to the protein kinase superfamily.
    
 0.670
BnaA07g38990D
BnaA07g38990D protein; Belongs to the protein kinase superfamily.
    
 0.670
BnaA07g07580D
BnaA07g07580D protein.
    
 0.667
BnaA07g07550D
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.667
BnaA01g06310D
BnaA01g06310D protein.
    
 0.660
BnaC02g23580D
BnaC02g23580D protein.
     
 0.655
BnaA02g17360D
BnaA02g17360D protein.
     
 0.655
BnaC01g44610D
BnaC01g44610D protein.
   
 
 0.654
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (14%) [HD]