STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC02g25440DBnaC02g25440D protein. (315 aa)    
Predicted Functional Partners:
BnaC03g71510D
BnaC03g71510D protein.
  
     0.539
BnaC07g31600D
BnaC07g31600D protein.
  
     0.538
BnaC05g21630D
BnaC05g21630D protein.
  
     0.536
BnaC03g24320D
BnaC03g24320D protein.
  
     0.534
BnaC03g59750D
BnaC03g59750D protein.
  
     0.533
BnaC03g59880D
BnaC03g59880D protein.
  
     0.532
BnaC09g38500D
BnaC09g38500D protein.
  
     0.532
BnaC06g02590D
BnaC06g02590D protein.
  
     0.532
BnaA08g04590D
BnaA08g04590D protein.
  
     0.532
BnaCnng03500D
BnaCnng03500D protein.
  
     0.531
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.