STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA09g44630DBnaA09g44630D protein. (181 aa)    
Predicted Functional Partners:
BnaA10g10230D
BnaA10g10230D protein.
  
 
 0.830
BnaA10g10200D
BnaA10g10200D protein.
  
 
 0.830
BnaCnng32060D
BnaCnng32060D protein.
  
 
 0.830
BnaCnng32620D
BnaCnng32620D protein.
  
 
 0.830
BnaC07g13460D
BnaA07g10260D protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 0.723
BnaA08g27140D
BnaA08g27140D protein.
  
 
 0.723
BnaC05g01210D
BnaC05g01210D protein.
  
 
 0.723
BnaA09g30340D
BnaA09g30340D protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 0.723
BnaC09g33330D
BnaC09g33330D protein.
  
 
 0.723
BnaA09g51320D
BnaA09g51320D protein.
  
 
 0.723
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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