STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA09g01180DBnaA09g01180D protein. (371 aa)    
Predicted Functional Partners:
BnaC08g11760D
BnaC08g11760D protein.
   
 0.952
BnaA03g46880D
BnaA03g46880D protein.
   
 0.952
BnaA08g14650D
BnaA08g14650D protein.
   
 0.952
BnaA01g14050D
BnaA01g14050D protein.
   
 0.952
BnaC03g44750D
BnaC03g44750D protein.
   
 0.929
BnaCnng21820D
BnaCnng21820D protein.
   
 0.929
BnaA04g05330D
BnaA04g05330D protein.
   
 0.923
BnaA03g00690D
BnaA03g00690D protein.
   
 0.895
BnaC02g03460D
BnaC02g03460D protein.
   
 0.895
BnaAnng11460D
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.894
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.