Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaA06g36930DBnaA06g36930D protein. (285 aa)    
Predicted Functional Partners:
BnaC01g36990D
BnaC01g36990D protein.
    
 0.734
BnaA01g29460D
BnaA01g29460D protein.
    
 0.734
BnaA03g49400D
BnaA03g49400D protein.
    
  0.695
BnaC07g41790D
BnaC07g41790D protein.
    
  0.695
BnaC02g34770D
BnaC02g34770D protein.
    
   0.685
BnaA06g34020D
BnaA06g34020D protein.
    
   0.685
BnaA09g35820D
BnaA09g35820D protein.
  
  
0.674
BnaCnng30890D
BnaCnng30890D protein.
  
 
   0.674
BnaA06g34400D
BnaA06g34400D protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
 
 0.672
BnaCnng64820D
BnaCnng64820D protein.
  
 
  
0.664
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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