STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC03g61710DBnaC03g61710D protein. (238 aa)    
Predicted Functional Partners:
BnaC01g22600D
BnaC01g22600D protein.
  
     0.473
BnaAnng10360D
BnaAnng10360D protein.
  
     0.468
BnaC01g22590D
BnaC01g22590D protein.
  
     0.467
BnaAnng10370D
BnaAnng10370D protein.
  
     0.465
BnaA06g15780D
BnaA06g15780D protein.
  
     0.462
BnaAnng41440D
BnaAnng41440D protein.
  
     0.457
BnaA05g17380D
BnaA05g17380D protein.
  
     0.453
BnaC08g14530D
BnaC08g14530D protein.
  
     0.451
BnaC05g30350D
BnaC05g30350D protein.
  
     0.447
BnaA01g36220D
BnaA01g36220D protein.
  
     0.436
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.