STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA08g13000DBnaA08g13000D protein. (253 aa)    
Predicted Functional Partners:
BnaC05g12460D
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.
  
 
 0.903
BnaA06g10940D
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.
  
 
 0.903
BnaA05g31080D
BnaA05g31080D protein.
  
 
 0.752
BnaC04g55480D
BnaC04g55480D protein.
  
 
 0.752
BnaC03g66410D
BnaC03g66410D protein.
  
 
 0.751
BnaA08g11450D
BnaA08g11450D protein.
  
 
 0.751
BnaC01g21430D
BnaC01g21430D protein.
  
 
 0.745
BnaC07g08490D
BnaC07g08490D protein.
  
 
 0.745
BnaC03g76960D
BnaC03g76960D protein.
  
 
 0.745
BnaCnng72200D
BnaCnng72200D protein.
  
 
 0.745
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (12%) [HD]