STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA06g02140DBnaA06g02140D protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (634 aa)    
Predicted Functional Partners:
BnaCnng10340D
BnaCnng10340D protein.
  
 0.981
BnaC04g47520D
BnaC04g47520D protein.
  
 0.979
BnaC03g23220D
BnaC03g23220D protein.
  
 0.979
BnaA03g19380D
BnaA03g19380D protein.
  
 0.979
BnaA03g12250D
BnaA03g12250D protein.
  
 0.978
BnaA05g11710D
Aspartate aminotransferase.
   
 0.957
BnaA03g51850D
Aspartate aminotransferase.
   
 0.957
BnaC04g36800D
Aspartate aminotransferase.
   
 0.957
BnaC09g13020D
Aspartate aminotransferase.
   
 0.957
BnaA03g54610D
Aspartate aminotransferase.
   
 0.957
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.