STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA05g17800DBnaA05g17800D protein. (277 aa)    
Predicted Functional Partners:
BnaA06g16370D
BnaA06g16370D protein.
  
 
0.916
BnaC04g55940D
BnaC04g55940D protein; Belongs to the complex I 75 kDa subunit family.
   
 
 0.872
BnaA04g15990D
BnaA04g15990D protein.
    
   0.865
BnaCnng12500D
BnaCnng12500D protein.
    
 
 0.863
BnaA02g34960D
BnaA02g34960D protein; Belongs to the complex I 20 kDa subunit family.
    
   0.851
BnaA06g13770D
BnaA06g13770D protein.
  
 
 
0.822
BnaC05g15190D
BnaC05g15190D protein.
    
 
0.818
BnaC05g44490D
BnaC05g44490D protein.
   
 
 0.798
BnaA05g30160D
BnaA05g30160D protein.
   
 
 0.798
BnaC03g75350D
BnaC03g75350D protein.
   
 
 0.798
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.