STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC07g03520DBnaC07g03520D protein. (176 aa)    
Predicted Functional Partners:
BnaC03g47110D
BnaC03g47110D protein.
    
 0.809
BnaA01g27100D
BnaA01g27100D protein.
   
 0.758
BnaA01g27120D
BnaA01g27120D protein.
   
 0.758
BnaAnng11060D
BnaAnng11060D protein.
   
 0.758
BnaCnng03720D
BnaCnng03720D protein.
   
 0.755
BnaA10g27390D
BnaA10g27390D protein.
   
 0.755
BnaC02g03620D
BnaC02g03620D protein.
   
 0.755
BnaA08g03140D
BnaA08g03140D protein.
   
 0.677
BnaC05g34630D
BnaC05g34630D protein.
    
 
 0.526
BnaA08g30620D
Pantothenate kinase 2; Catalyzes the phosphorylation of pantothenate the first step in CoA biosynthesis. May play a role in the physiological regulation of the intracellular CoA concentration.
    
 
 0.526
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.