STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC01g37710DBnaC01g37710D protein. (543 aa)    
Predicted Functional Partners:
BnaCnng65600D
BnaCnng65600D protein.
  
 
  0.526
BnaA09g09130D
BnaA09g09130D protein.
  
 
  0.513
BnaA05g17370D
BnaA05g17370D protein.
  
 
  0.511
BnaC09g09360D
BnaC09g09360D protein.
  
 
  0.511
BnaC03g47790D
BnaC03g47790D protein.
  
 
  0.510
BnaC03g66580D
BnaC03g66580D protein.
  
 
 
0.510
BnaA03g53310D
BnaA03g53310D protein.
  
 
  0.510
BnaA06g39250D
BnaA06g39250D protein.
  
 
  0.510
BnaA07g01400D
BnaA07g01400D protein.
  
 
  0.508
BnaA03g47790D
BnaA03g47790D protein.
  
 
  0.507
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.