STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC03g42320DBnaC03g42320D protein. (49 aa)    
Predicted Functional Partners:
BnaC05g24120D
BnaC05g24120D protein.
 
 
 0.650
BnaA07g04980D
BnaA07g04980D protein.
  
 
 0.592
BnaC02g20660D
BnaC02g20660D protein.
  
  
  0.582
BnaCnng40740D
BnaCnng40740D protein.
  
  
  0.547
BnaC03g17190D
BnaC03g17190D protein; Belongs to the heat shock protein 70 family.
  
 0.539
BnaC06g13860D
BnaC06g13860D protein; Belongs to the heat shock protein 70 family.
  
 0.539
BnaC08g42820D
BnaC08g42820D protein; Belongs to the heat shock protein 70 family.
  
 0.539
BnaA03g17100D
BnaA03g17100D protein; Belongs to the heat shock protein 70 family.
  
 0.539
BnaC07g48050D
BnaC07g48050D protein; Belongs to the heat shock protein 70 family.
  
 0.539
BnaUnng02040D
BnaUnng02040D protein.
  
 
   0.539
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.