STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC05g32480DBnaC05g32480D protein. (545 aa)    
Predicted Functional Partners:
BnaC09g41780D
BnaC09g41780D protein.
  
0.998
BnaCnng05830D
BnaA05g33440D protein.
  
0.998
BnaA08g19100D
BnaA08g19100D protein.
  
0.997
BnaA07g36780D
BnaA07g36780D protein.
   
0.997
BnaC03g75860D
BnaC03g75860D protein.
   
0.997
BnaAnng03000D
T-complex protein 1 subunit gamma.
   
0.995
BnaC03g34470D
T-complex protein 1 subunit gamma.
   
0.995
BnaA02g05110D
BnaA02g05110D protein.
  
0.992
BnaC09g37000D
BnaC09g37000D protein.
  
0.992
BnaAnng35880D
BnaAnng35880D protein.
  
0.992
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.