STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC02g40220DBnaC02g40220D protein. (196 aa)    
Predicted Functional Partners:
BnaC02g02230D
BnaC02g02230D protein.
  
 
 0.953
BnaC09g39860D
BnaC09g39860D protein.
  
 0.953
BnaA10g16850D
BnaA10g16850D protein.
  
 0.953
BnaCnng04780D
BnaCnng04780D protein.
  
 0.952
BnaA09g28350D
BnaA09g28350D protein.
  
 0.952
BnaA08g19240D
BnaA08g19240D protein.
  
 0.952
BnaCnng57400D
BnaCnng57400D protein.
  
 0.952
BnaC03g44420D
BnaC03g44420D protein.
  
 0.944
BnaC09g20870D
BnaC09g20870D protein.
  
 0.944
BnaA02g23570D
BnaA02g23570D protein.
  
 0.944
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.