STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC09g41630DBnaC09g41630D protein. (513 aa)    
Predicted Functional Partners:
BnaAnng38970D
BnaAnng38970D protein.
      
 0.643
BnaC08g12000D
BnaC08g12000D protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
      
 0.570
BnaC08g12030D
BnaC08g12030D protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
      
 0.570
BnaA03g47270D
BnaA03g47270D protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
      
 0.570
BnaC01g32130D
BnaC01g32130D protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
      
 0.570
BnaA06g11480D
BnaA06g11480D protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
      
 0.570
BnaA01g25140D
BnaA01g25140D protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
      
 0.570
BnaA08g30850D
BnaA08g30850D protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
      
 0.570
BnaA03g56140D
BnaA03g56140D protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
      
 0.570
BnaA07g39110D
BnaA07g39110D protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
      
 0.570
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.