STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA02g21990DMethyltransferase. (620 aa)    
Predicted Functional Partners:
BnaC08g08930D
BnaC08g08930D protein.
  
     0.543
BnaUnng00150D
BnaUnng00150D protein.
  
     0.542
BnaA03g45750D
BnaA03g45750D protein.
  
     0.541
BnaC03g16510D
BnaC03g16510D protein.
  
     0.541
BnaCnng64200D
BnaCnng64200D protein.
  
     0.541
BnaA04g12150D
BnaA04g12150D protein.
  
     0.540
BnaA03g48710D
BnaA03g48710D protein.
  
     0.540
BnaC04g22510D
BnaC04g22510D protein.
  
     0.540
BnaC03g77770D
BnaC03g77770D protein.
  
     0.540
BnaUnng02740D
BnaUnng02740D protein.
  
     0.540
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.