STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA05g18070DBnaA05g18070D protein. (176 aa)    
Predicted Functional Partners:
BnaCnng15270D
BnaCnng15270D protein.
  
     0.523
BnaC09g43130D
BnaC09g43130D protein.
  
     0.522
BnaC04g53910D
BnaC04g53910D protein.
  
     0.521
BnaC05g14960D
BnaC05g14960D protein.
  
     0.517
BnaA09g12420D
BnaA09g12420D protein.
  
     0.514
BnaC05g12040D
BnaC05g12040D protein.
  
     0.509
BnaC06g02570D
BnaC06g02570D protein.
  
     0.508
BnaA05g16210D
BnaA05g16210D protein.
  
     0.506
BnaA09g02900D
BnaA09g02900D protein.
  
     0.504
BnaA08g02770D
BnaA08g02770D protein.
  
     0.503
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.