STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA07g10410DBnaA07g10410D protein. (100 aa)    
Predicted Functional Partners:
BnaA05g27880D
BnaA05g27880D protein.
   
 0.892
BnaA06g38920D
BnaA06g38920D protein.
   
 0.841
BnaC01g00580D
BnaC01g00580D protein; Belongs to the MICOS complex subunit Mic60 family.
     
 0.644
BnaA01g05700D
BnaA01g05700D protein; Belongs to the MICOS complex subunit Mic60 family.
     
 0.644
BnaC03g76330D
BnaC03g76330D protein; Belongs to the MICOS complex subunit Mic60 family.
     
 0.644
BnaA07g01310D
Metaxin; Involved in transport of proteins into the mitochondrion. Belongs to the metaxin family.
    
 0.542
BnaAnng22370D
Metaxin; Involved in transport of proteins into the mitochondrion. Belongs to the metaxin family.
    
 0.542
BnaA04g20730D
BnaA04g20730D protein.
    
 0.537
BnaC04g56520D
BnaC04g56520D protein.
    
 0.537
BnaA08g12190D
Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.
   
  
 0.515
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.