STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA07g10150DAuxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family. (573 aa)    
Predicted Functional Partners:
BnaC05g09250D
BnaC05g09250D protein.
  
     0.520
BnaC09g42240D
BnaC09g42240D protein.
  
     0.520
BnaC04g49450D
BnaC04g49450D protein.
  
     0.513
BnaA01g27540D
BnaA01g27540D protein.
  
     0.512
BnaC05g48430D
COBRA-like protein; Belongs to the COBRA family.
  
     0.512
BnaAnng16830D
COBRA-like protein; Belongs to the COBRA family.
  
     0.512
BnaA01g17740D
BnaA01g17740D protein.
  
     0.511
BnaA06g32940D
BnaA06g32940D protein.
  
     0.510
BnaC04g03320D
BnaC04g03320D protein.
  
     0.510
BnaC01g22090D
BnaC01g22090D protein.
  
     0.509
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.