STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC06g11020DBnaC06g11020D protein. (416 aa)    
Predicted Functional Partners:
BnaC03g54910D
BnaC03g54910D protein.
      
 0.579
BnaC03g13560D
BnaC03g13560D protein.
      
 0.579
BnaA06g38980D
BnaA06g38980D protein.
      
 0.579
BnaCnng75490D
BnaCnng75490D protein.
      
 0.579
BnaA03g10890D
BnaA03g10890D protein.
      
 0.577
BnaC04g47350D
BnaC04g47350D protein.
  
     0.531
BnaA04g24520D
BnaA04g24520D protein.
  
 
   0.447
BnaCnng52600D
BnaCnng52600D protein.
  
     0.431
BnaA07g00650D
BnaA07g00650D protein.
    
 0.421
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.