STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA03g60000DBnaA03g60000D protein; Belongs to the terpene synthase family. (777 aa)    
Predicted Functional Partners:
BnaA03g57690D
BnaA03g57690D protein; Belongs to the cytochrome P450 family.
   
  
 0.558
BnaC03g74240D
BnaC03g74240D protein; Belongs to the cytochrome P450 family.
   
  
 0.558
BnaC01g22940D
BnaC01g22940D protein.
  
     0.509
BnaA01g19010D
BnaA01g19010D protein.
  
     0.492
BnaA09g43550D
BnaA09g43550D protein.
  
     0.484
BnaA05g34170D
BnaA05g34170D protein.
  
     0.478
BnaC06g02550D
BnaC06g02550D protein.
  
   
 0.459
BNM2C
BURP domain-containing protein BNM2C.
  
   
 0.458
BnaA06g03190D
BnaA06g03190D protein.
  
   
 0.454
BNM2A
BURP domain-containing protein BNM2A.
  
   
 0.454
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.