Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaC09g41870DBnaC09g41870D protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (637 aa)    
Predicted Functional Partners:
BnaA09g45620D
BnaA09g45620D protein.
    
 
 0.929
BnaC05g10550D
BnaC05g10550D protein.
    
 
 0.929
BnaA06g09110D
BnaA06g09110D protein.
    
 
 0.929
BnaC07g31500D
BnaC07g31500D protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
  
 
0.828
BnaA04g13550D
BnaA04g13550D protein.
  
 
0.822
BnaCnng62860D
BnaCnng62860D protein.
   
 0.820
BnaA09g35820D
BnaA09g35820D protein.
  
 
 
0.818
BnaC03g64840D
BnaC03g64840D protein.
  
 
  
0.814
BnaA01g33140D
Eukaryotic translation initiation factor 3 subunit M; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
  
 
  
0.814
BnaA02g29300D
BnaA02g29300D protein.
    
 
 0.798
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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