Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BnaA06g19430D | BnaA07g04280D | A0A078GPY7 | A0A078H6B1 | BnaA06g19430D protein. | BnaA07g04280D protein. | 0.940 |
BnaA06g19430D | BnaA09g19870D | A0A078GPY7 | A0A078IAV5 | BnaA06g19430D protein. | BnaA09g19870D protein. | 0.949 |
BnaA06g19430D | BnaC01g23800D | A0A078GPY7 | A0A078GMU3 | BnaA06g19430D protein. | BnaC01g23800D protein. | 0.958 |
BnaA06g19430D | BnaC02g46810D | A0A078GPY7 | A0A078J8I6 | BnaA06g19430D protein. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.954 |
BnaA06g19430D | BnaC06g14680D | A0A078GPY7 | A0A078F2K8 | BnaA06g19430D protein. | BnaC06g14680D protein. | 0.981 |
BnaA06g19430D | BnaC09g21870D | A0A078GPY7 | A0A078HMQ8 | BnaA06g19430D protein. | BnaC09g21870D protein. | 0.949 |
BnaA06g19430D | psbA | A0A078GPY7 | D1L8L8 | BnaA06g19430D protein. | Photosystem II protein D1; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. | 0.981 |
BnaA06g19430D | psbE | A0A078GPY7 | D1L8Q5 | BnaA06g19430D protein. | Cytochrome b559 subunit alpha; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family. | 0.981 |
BnaA06g19430D | psbH | A0A078GPY7 | D1L8R7 | BnaA06g19430D protein. | Photosystem II reaction center protein H; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. | 0.982 |
BnaA07g04280D | BnaA06g19430D | A0A078H6B1 | A0A078GPY7 | BnaA07g04280D protein. | BnaA06g19430D protein. | 0.940 |
BnaA07g04280D | BnaA09g19870D | A0A078H6B1 | A0A078IAV5 | BnaA07g04280D protein. | BnaA09g19870D protein. | 0.969 |
BnaA07g04280D | BnaC01g23800D | A0A078H6B1 | A0A078GMU3 | BnaA07g04280D protein. | BnaC01g23800D protein. | 0.963 |
BnaA07g04280D | BnaC02g46810D | A0A078H6B1 | A0A078J8I6 | BnaA07g04280D protein. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.982 |
BnaA07g04280D | BnaC04g24890D | A0A078H6B1 | A0A078IDC9 | BnaA07g04280D protein. | BnaC04g24890D protein. | 0.940 |
BnaA07g04280D | BnaC06g14680D | A0A078H6B1 | A0A078F2K8 | BnaA07g04280D protein. | BnaC06g14680D protein. | 0.968 |
BnaA07g04280D | BnaC09g21870D | A0A078H6B1 | A0A078HMQ8 | BnaA07g04280D protein. | BnaC09g21870D protein. | 0.969 |
BnaA07g04280D | psbA | A0A078H6B1 | D1L8L8 | BnaA07g04280D protein. | Photosystem II protein D1; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. | 0.968 |
BnaA07g04280D | psbE | A0A078H6B1 | D1L8Q5 | BnaA07g04280D protein. | Cytochrome b559 subunit alpha; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family. | 0.967 |
BnaA07g04280D | psbH | A0A078H6B1 | D1L8R7 | BnaA07g04280D protein. | Photosystem II reaction center protein H; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. | 0.976 |
BnaA09g19870D | BnaA06g19430D | A0A078IAV5 | A0A078GPY7 | BnaA09g19870D protein. | BnaA06g19430D protein. | 0.949 |
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