STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA02g23770DBnaA02g23770D protein. (267 aa)    
Predicted Functional Partners:
BnaC09g12660D
BnaC09g12660D protein.
  
     0.494
BnaC09g39460D
BnaC09g39460D protein.
  
     0.468
BnaA06g16060D
BnaA06g16060D protein.
  
     0.449
BnaAnng39300D
BnaAnng39300D protein.
  
     0.431
BnaC03g69950D
BnaC03g69950D protein.
  
     0.424
BnaA09g48170D
BnaA09g48170D protein.
  
     0.424
BnaA09g42890D
BnaA09g42890D protein.
  
     0.420
BnaA01g27060D
BnaA01g27060D protein.
  
     0.418
BnaC03g48220D
BnaC03g48220D protein.
  
     0.417
BnaA05g17070D
BnaA05g17070D protein.
  
     0.407
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.