STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC02g19140DBnaC02g19140D protein. (162 aa)    
Predicted Functional Partners:
BnaA03g53910D
BnaA03g53910D protein.
  
     0.441
BnaCnng54170D
BnaCnng54170D protein.
  
    0.440
BnaC06g05460D
BnaC06g05460D protein.
  
     0.437
BnaA02g18790D
BnaA02g18790D protein.
  
     0.430
BnaA06g01870D
BnaA06g01870D protein.
  
     0.429
BnaC02g24890D
BnaC02g24890D protein.
  
     0.427
BnaC06g00500D
BnaC06g00500D protein.
  
     0.426
BnaC08g02700D
BnaC08g02700D protein.
  
     0.423
BnaA03g56020D
BnaA03g56020D protein.
  
     0.422
BnaA06g35170D
BnaA06g35170D protein.
  
     0.420
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.