Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaC06g02870DBnaC06g02870D protein. (183 aa)    
Predicted Functional Partners:
BnaA08g28160D
BnaA08g28160D protein.
      
 0.706
BnaA05g10570D
BnaA05g10570D protein.
      
 0.706
BnaA05g08950D
BnaA05g08950D protein.
      
 0.706
BnaA04g14880D
BnaA04g14880D protein.
      
 0.706
BnaC04g37400D
BnaC04g37400D protein.
      
 0.706
BnaC02g22760D
BnaC02g22760D protein.
      
 0.706
BnaA04g14690D
BnaA04g14690D protein.
      
 0.706
BnaA02g16770D
BnaA02g16770D protein.
      
 0.706
BnaC04g56380D
BnaC04g56380D protein.
      
 0.706
BnaA03g56320D
BnaA03g56320D protein.
      
 0.702
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.