STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA07g04890DBnaA07g04890D protein. (413 aa)    
Predicted Functional Partners:
BnaC04g00430D
BnaC04g00430D protein; Belongs to the protein kinase superfamily.
  
 
 
 0.674
BnaC03g44780D
BnaC03g44780D protein.
  
   
 0.673
BnaC03g66100D
BnaC03g66100D protein.
  
   
 0.598
BnaA09g00780D
BnaA09g00780D protein.
  
  
 0.544
BnaC03g30950D
BnaC03g30950D protein.
  
  
 0.523
BnaA04g27940D
BnaA04g27940D protein.
  
  
 0.515
BnaCnng19190D
BnaCnng19190D protein.
  
  
 0.514
BnaC03g30940D
BnaC03g30940D protein.
  
  
 0.509
BnaC08g44900D
BnaC08g44900D protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
  
 
 
 0.506
BnaAnng28210D
BnaAnng28210D protein.
  
   
 0.504
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.