STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC05g43810DBnaC05g43810D protein. (562 aa)    
Predicted Functional Partners:
MPK5.1
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 0.615
BnaA02g09290D
BnaA02g09290D protein; Belongs to the protein kinase superfamily.
    
 0.592
BnaCnng07900D
BnaCnng07900D protein.
    
 
 0.572
BnaAnng02750D
BnaAnng02750D protein.
    
 0.501
BnaC03g74970D
BnaC03g74970D protein.
      
 0.430
BnaA09g20650D
BnaA09g20650D protein.
     
 0.421
BnaA05g32040D
BnaA05g32040D protein.
     
 0.421
BnaCnng69280D
BnaCnng69280D protein.
     
 0.421
BnaC05g46680D
BnaC05g46680D protein.
     
 0.419
BnaCnng68710D
BnaCnng68710D protein.
      
 0.416
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.