STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC05g43840DNon-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (460 aa)    
Predicted Functional Partners:
BnaC05g43690D
BnaC05g43690D protein.
    
 0.881
BnaA05g37130D
BnaA05g37130D protein.
    
 0.881
BnaAnng24320D
BnaAnng24320D protein.
    
 0.881
BnaAnng26810D
BnaAnng26810D protein.
  
 
0.874
BnaA05g28300D
BnaA05g28300D protein.
  
 
0.873
BnaA01g31600D
BnaA01g31600D protein.
  
 
0.873
BnaC09g50620D
BnaC09g50620D protein.
  
 
0.873
BnaC02g00390D
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
 0.834
BnaC03g77310D
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
 0.834
BnaA08g30710D
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
 0.834
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.