Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaC06g02630DBnaC06g02630D protein. (665 aa)    
Predicted Functional Partners:
BnaAnng12560D
BnaAnng12560D protein.
    
 0.572
BnaCnng32140D
BnaCnng32140D protein.
      
 0.564
BnaA03g53770D
BnaA03g53770D protein.
     
 0.552
BnaC07g51230D
BnaC07g51230D protein.
     
 0.552
BnaAnng32060D
BnaAnng32060D protein.
    
 
 0.489
BnaA05g18780D
BnaA05g18780D protein.
      
 0.487
BnaC05g31760D
BnaC05g31760D protein.
      
 0.487
BnaC08g12040D
BnaC08g12040D protein.
      
 0.482
BnaA09g20900D
BnaA09g20900D protein.
     
 0.453
BnaA06g14740D
BnaA06g14740D protein.
      
 0.429
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.