STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC06g02630DBnaC06g02630D protein. (665 aa)    
Predicted Functional Partners:
BnaAnng32060D
BnaAnng32060D protein.
    
 
 0.485
BnaCnng32140D
BnaCnng32140D protein.
      
 0.469
BnaA03g53770D
BnaA03g53770D protein.
   
 0.461
BnaC07g51230D
BnaC07g51230D protein.
   
 0.461
BnaA05g18780D
BnaA05g18780D protein.
      
 0.447
BnaC05g31760D
BnaC05g31760D protein.
      
 0.447
BnaC08g12040D
BnaC08g12040D protein.
      
 0.429
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.