STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC02g36440DBnaC02g36440D protein. (133 aa)    
Predicted Functional Partners:
BnaC03g27330D
BnaC03g27330D protein.
  
  
 0.591
BnaA03g52900D
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
  
 0.591
BnaC03g64990D
BnaC03g64990D protein.
  
   
 0.570
BnaA04g05960D
BnaA04g05960D protein.
    
  0.568
BnaC06g24950D
BnaC06g24950D protein.
  
  
  0.567
BnaCnng53620D
BnaCnng53620D protein.
    
  0.551
BnaC03g14780D
BnaC03g14780D protein.
  
   
 0.544
BnaAnng18640D
BnaAnng18640D protein.
  
  
  0.544
BnaC09g09110D
BnaC09g09110D protein.
  
  
  0.539
BnaC05g51190D
BnaC05g51190D protein.
  
     0.538
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.