Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BnaA01g18910D | BnaA08g27050D | A0A078GTI0 | A0A078GXH3 | BnaA01g18910D protein. | BnaA08g27050D protein. | 0.718 |
BnaA01g18910D | BnaA08g27430D | A0A078GTI0 | A0A078FRE4 | BnaA01g18910D protein. | Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing. | 0.646 |
BnaA01g18910D | BnaA09g03870D | A0A078GTI0 | A0A078G2T5 | BnaA01g18910D protein. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.622 |
BnaA01g18910D | BnaAnng28130D | A0A078GTI0 | A0A078JTG7 | BnaA01g18910D protein. | BnaAnng28130D protein. | 0.718 |
BnaA01g18910D | BnaAnng33680D | A0A078GTI0 | A0A078JYA6 | BnaA01g18910D protein. | BnaAnng33680D protein. | 0.642 |
BnaA01g18910D | BnaC03g27570D | A0A078GTI0 | A0A078G4Q8 | BnaA01g18910D protein. | NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family. | 0.934 |
BnaA01g18910D | BnaC08g43210D | A0A078GTI0 | A0A078GCA9 | BnaA01g18910D protein. | BnaC08g43210D protein. | 0.718 |
BnaA01g18910D | BnaCnng14330D | A0A078GTI0 | A0A078I751 | BnaA01g18910D protein. | BnaCnng14330D protein. | 0.718 |
BnaA01g18910D | BnaCnng14350D | A0A078GTI0 | A0A078I9C9 | BnaA01g18910D protein. | BnaCnng14350D protein. | 0.718 |
BnaA01g18910D | BnaCnng27110D | A0A078GTI0 | A0A078IZB4 | BnaA01g18910D protein. | BnaCnng27110D protein. | 0.718 |
BnaA08g27050D | BnaA01g18910D | A0A078GXH3 | A0A078GTI0 | BnaA08g27050D protein. | BnaA01g18910D protein. | 0.718 |
BnaA08g27050D | BnaA08g27430D | A0A078GXH3 | A0A078FRE4 | BnaA08g27050D protein. | Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing. | 0.872 |
BnaA08g27050D | BnaA09g03870D | A0A078GXH3 | A0A078G2T5 | BnaA08g27050D protein. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.869 |
BnaA08g27050D | BnaC03g27570D | A0A078GXH3 | A0A078G4Q8 | BnaA08g27050D protein. | NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family. | 0.980 |
BnaA08g27430D | BnaA01g18910D | A0A078FRE4 | A0A078GTI0 | Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing. | BnaA01g18910D protein. | 0.646 |
BnaA08g27430D | BnaA08g27050D | A0A078FRE4 | A0A078GXH3 | Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing. | BnaA08g27050D protein. | 0.872 |
BnaA08g27430D | BnaA09g03870D | A0A078FRE4 | A0A078G2T5 | Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.996 |
BnaA08g27430D | BnaAnng28130D | A0A078FRE4 | A0A078JTG7 | Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing. | BnaAnng28130D protein. | 0.872 |
BnaA08g27430D | BnaC03g27570D | A0A078FRE4 | A0A078G4Q8 | Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing. | NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family. | 0.949 |
BnaA08g27430D | BnaC08g43210D | A0A078FRE4 | A0A078GCA9 | Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing. | BnaC08g43210D protein. | 0.872 |
page 1 of 4