STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC07g32270DBnaC07g32270D protein. (317 aa)    
Predicted Functional Partners:
BnaA07g36000D
O-acyltransferase.
    
 0.985
BnaAnng30990D
O-acyltransferase.
    
 0.985
BnaC08g46660D
BnaC08g46660D protein.
   
 
 0.946
BnaA03g00460D
BnaA03g00460D protein.
   
 
 0.924
BnaC09g46470D
BnaC09g46470D protein.
   
 
 0.924
BnaA10g27560D
BnaA10g27560D protein.
   
 
 0.924
BnaC01g23350D
BnaC01g23350D protein.
  
  
0.902
BnaA01g19390D
BnaA01g19390D protein.
  
  
0.902
BnaA09g45250D
BnaA09g45250D protein.
     
 0.881
BnaA06g35100D
BnaA06g35100D protein.
     
 0.861
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.