STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA02g10140DBnaA02g10140D protein. (112 aa)    
Predicted Functional Partners:
BnaC06g04460D
BnaC06g04460D protein.
  
     0.507
BnaC03g14530D
BnaC03g14530D protein.
  
     0.505
BnaC04g27260D
BnaC04g27260D protein.
  
     0.504
BnaC09g41150D
BnaC09g41150D protein.
  
     0.502
BnaCnng51220D
BnaCnng51220D protein.
  
     0.496
BnaA09g14300D
BnaA09g14300D protein.
  
     0.495
BnaA03g01190D
BnaA03g01190D protein.
  
     0.494
BnaA05g29720D
BnaA05g29720D protein.
  
     0.491
BnaAnng34160D
BnaAnng34160D protein.
  
     0.481
BnaC09g14840D
BnaC09g14840D protein.
  
     0.480
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.