STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA02g25170DBnaA02g25170D protein; Belongs to the disease resistance NB-LRR family. (893 aa)    
Predicted Functional Partners:
BnaC04g32150D
BnaC04g32150D protein.
      
 0.515
BnaC03g47400D
BnaC03g47400D protein.
      
 0.513
BnaC02g47330D
BnaC02g47330D protein.
      
 0.511
BnaC09g12580D
BnaC09g12580D protein.
      
 0.508
BnaA01g33750D
BnaA01g33750D protein.
    
 
 0.494
BnaC03g61670D
BnaC03g61670D protein.
    
 
 0.494
BnaC03g63240D
BnaC03g63240D protein.
      
 0.493
BnaC03g63280D
BnaC03g63280D protein.
      
 0.493
BnaC07g34320D
BnaC07g34320D protein.
      
 0.465
BnaC01g21000D
BnaC01g21000D protein.
      
 0.465
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.