STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA02g34010DBnaA02g34010D protein. (421 aa)    
Predicted Functional Partners:
BnaA03g56060D
BnaA03g56060D protein.
  
   
 0.541
BnaC09g37200D
BnaC09g37200D protein.
  
   
 0.499
BnaCnng65610D
BnaCnng65610D protein.
  
     0.497
BnaA06g15330D
BnaA06g15330D protein.
  
     0.496
BnaA07g09870D
BnaA07g09870D protein.
  
     0.496
BnaC07g48270D
BnaC07g48270D protein.
  
     0.491
BnaC08g19870D
BnaC08g19870D protein.
  
     0.490
BnaC09g37060D
BnaC09g37060D protein.
  
     0.485
BnaAnng23110D
BnaAnng23110D protein.
  
     0.483
BnaC05g13140D
BnaC05g13140D protein.
  
     0.477
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.