STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA04g25900DBnaA04g25900D protein. (232 aa)    
Predicted Functional Partners:
BnaC04g15640D
BnaC04g15640D protein.
  
   
 0.480
BnaC07g16190D
BnaC07g16190D protein.
  
   
 0.479
BnaA09g54740D
BnaA09g54740D protein.
  
   
 0.476
BnaC03g57640D
BnaC03g57640D protein.
  
     0.462
BnaA07g08810D
BnaA07g08810D protein.
  
     0.450
BnaA09g27920D
BnaA09g27920D protein.
  
     0.446
BnaAnng20260D
BnaAnng20260D protein.
  
     0.444
BnaA02g13950D
BnaA02g13950D protein.
  
     0.440
BnaC02g36640D
BnaC02g36640D protein.
  
     0.438
BnaCnng38870D
BnaCnng38870D protein.
  
     0.436
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.