Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaC04g27370DBnaC04g27370D protein. (743 aa)    
Predicted Functional Partners:
BnaCnng13450D
BnaCnng13450D protein.
      
 0.747
BnaA06g33700D
BnaA06g33700D protein.
      
 0.747
BnaA08g03310D
Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.
      
 0.709
BnaA04g05250D
BnaA04g05250D protein.
      
 0.687
BnaA05g19710D
BnaA05g19710D protein.
      
 0.682
BnaC05g30570D
BnaC05g30570D protein.
      
 0.682
BnaC06g13270D
BnaC06g13270D protein.
      
 0.679
BnaC06g29610D
BnaC06g29610D protein.
      
 0.679
BnaC09g14600D
BnaC09g14600D protein.
      
 0.679
BnaAnng06060D
BnaAnng06060D protein.
      
 0.679
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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