STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA10g10640DBnaA10g10640D protein. (369 aa)    
Predicted Functional Partners:
BnaAnng31290D
BnaAnng31290D protein.
  
 
   0.537
BnaA02g12720D
BnaA02g12720D protein.
  
 
   0.535
BnaC02g45310D
BnaC02g45310D protein.
  
 
   0.534
BnaC01g23450D
BnaC01g23450D protein.
  
     0.533
BnaCnng19760D
BnaCnng19760D protein.
  
     0.533
BnaA03g18620D
BnaA03g18620D protein.
  
     0.530
BnaA01g19480D
BnaA01g19480D protein.
  
     0.530
BnaC04g12630D
BnaC04g12630D protein.
  
     0.526
BnaA09g16650D
BnaA09g16650D protein.
  
     0.526
BnaC03g22110D
BnaC03g22110D protein.
  
     0.525
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.