STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA08g26230DBnaA08g26230D protein. (105 aa)    
Predicted Functional Partners:
BnaC03g70420D
BnaC03g70420D protein.
  
     0.496
BnaC03g70410D
BnaC03g70410D protein.
  
     0.496
BnaA09g04080D
BnaA09g04080D protein.
  
     0.457
BnaA09g35170D
BnaA09g35170D protein.
  
     0.451
BnaC08g26430D
BnaC08g26430D protein.
  
     0.451
BnaCnng57330D
BnaCnng57330D protein.
  
     0.416
BnaC09g38890D
BnaC09g38890D protein.
  
     0.411
BnaA03g48230D
BnaA03g48230D protein.
  
     0.407
BnaA03g53390D
BnaA03g53390D protein.
  
     0.403
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.