STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA10g12360DBnaA10g12360D protein. (210 aa)    
Predicted Functional Partners:
BnaA09g02540D
BnaA09g02540D protein.
  
   
 0.654
BnaA02g29670D
BnaA02g29670D protein.
  
   
 0.599
BnaA07g08500D
BnaA07g08500D protein.
  
   
 0.578
BnaC06g31550D
BnaC06g31550D protein.
  
     0.539
BnaA04g29440D
BnaA04g29440D protein.
  
     0.539
BnaA03g00140D
BnaA03g00140D protein.
  
     0.538
BnaAnng29080D
BnaAnng29080D protein.
  
     0.538
BnaA03g12840D
BnaA03g12840D protein.
  
     0.537
BnaCnng47350D
BnaCnng47350D protein.
  
     0.537
BnaA01g27360D
BnaA01g27360D protein.
  
     0.536
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.