STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA02g33780DBnaA02g33780D protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (422 aa)    
Predicted Functional Partners:
BnaC09g43250D
BnaC09g43250D protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
   
 0.577
BnaA02g30320D
BnaA02g30320D protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
   
 0.577
BnaA10g29480D
BnaA10g29480D protein.
  
     0.514
BnaC02g28770D
BnaC02g28770D protein.
   
 
 0.506
BnaA09g15710D
BnaA09g15710D protein.
   
 
 0.506
BnaA03g60670D
BnaA03g60670D protein.
   
 
 0.485
BnaC04g52010D
BnaC04g52010D protein.
      
 0.469
BnaA04g11940D
Phenylalanine ammonia-lyase.
      
 0.467
BnaA09g03290D
BnaA09g03290D protein.
      
 0.465
BnaC01g29820D
BnaC01g29820D protein.
   
 
 0.462
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.