STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC06g16000DBnaC06g16000D protein; Belongs to the cytochrome P450 family. (499 aa)    
Predicted Functional Partners:
BnaC02g36740D
BnaC02g36740D protein; Belongs to the cytochrome P450 family.
  
  
  0.495
BnaC06g25050D
BnaC06g25050D protein; Belongs to the cytochrome P450 family.
  
  
  0.479
BnaC07g32730D
3-ketoacyl-CoA synthase.
    
 
 0.477
BnaA05g15770D
BnaA05g15770D protein; Belongs to the cytochrome P450 family.
  
  
  0.474
BnaC01g22310D
BnaC01g22310D protein; Belongs to the cytochrome P450 family.
  
  
  0.464
BnaA02g30560D
3-ketoacyl-CoA synthase.
    
 
 0.449
BnaA03g58050D
BnaA03g58050D protein; Belongs to the cytochrome P450 family.
  
   
 0.445
BnaA09g16780D
BnaA09g16780D protein; Belongs to the cytochrome P450 family.
  
  
  0.431
BnaA08g07100D
BnaA08g07100D protein.
  
 0.430
BnaCnng48170D
BnaCnng48170D protein.
  
 0.430
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.