Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BnaA02g06670D | BnaA04g05330D | A0A078F776 | A0A078GCW5 | Histone H2B; Belongs to the histone H2B family. | BnaA04g05330D protein. | 0.916 |
BnaA02g06670D | BnaC08g02310D | A0A078F776 | A0A078H5R4 | Histone H2B; Belongs to the histone H2B family. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.992 |
BnaA02g06670D | BnaCnng06460D | A0A078F776 | A0A078H3S0 | Histone H2B; Belongs to the histone H2B family. | Histone H2A; Belongs to the histone H2A family. | 0.848 |
BnaA04g05330D | BnaA02g06670D | A0A078GCW5 | A0A078F776 | BnaA04g05330D protein. | Histone H2B; Belongs to the histone H2B family. | 0.916 |
BnaA04g05330D | BnaA07g37520D | A0A078GCW5 | A0A078JW50 | BnaA04g05330D protein. | Histone H2B; Belongs to the histone H2B family. | 0.916 |
BnaA04g05330D | BnaA07g37600D | A0A078GCW5 | A0A078INV5 | BnaA04g05330D protein. | Histone H2B; Belongs to the histone H2B family. | 0.916 |
BnaA04g05330D | BnaA10g12870D | A0A078GCW5 | A0A078H2F5 | BnaA04g05330D protein. | Histone H2B; Belongs to the histone H2B family. | 0.916 |
BnaA04g05330D | BnaC04g15480D | A0A078GCW5 | A0A078FRK5 | BnaA04g05330D protein. | Histone H2B; Belongs to the histone H2B family. | 0.916 |
BnaA04g05330D | BnaC04g27070D | A0A078GCW5 | A0A078H035 | BnaA04g05330D protein. | Histone H2B; Belongs to the histone H2B family. | 0.916 |
BnaA04g05330D | BnaC06g14890D | A0A078GCW5 | A0A078EZR6 | BnaA04g05330D protein. | Histone H2B; Belongs to the histone H2B family. | 0.916 |
BnaA04g05330D | BnaC08g02310D | A0A078GCW5 | A0A078H5R4 | BnaA04g05330D protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.981 |
BnaA04g05330D | BnaC09g36190D | A0A078GCW5 | A0A078GP04 | BnaA04g05330D protein. | Histone H2B; Belongs to the histone H2B family. | 0.916 |
BnaA04g05330D | BnaCnng06460D | A0A078GCW5 | A0A078H3S0 | BnaA04g05330D protein. | Histone H2A; Belongs to the histone H2A family. | 0.922 |
BnaA07g37520D | BnaA04g05330D | A0A078JW50 | A0A078GCW5 | Histone H2B; Belongs to the histone H2B family. | BnaA04g05330D protein. | 0.916 |
BnaA07g37520D | BnaC08g02310D | A0A078JW50 | A0A078H5R4 | Histone H2B; Belongs to the histone H2B family. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.991 |
BnaA07g37520D | BnaCnng06460D | A0A078JW50 | A0A078H3S0 | Histone H2B; Belongs to the histone H2B family. | Histone H2A; Belongs to the histone H2A family. | 0.849 |
BnaA07g37600D | BnaA04g05330D | A0A078INV5 | A0A078GCW5 | Histone H2B; Belongs to the histone H2B family. | BnaA04g05330D protein. | 0.916 |
BnaA07g37600D | BnaC08g02310D | A0A078INV5 | A0A078H5R4 | Histone H2B; Belongs to the histone H2B family. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.992 |
BnaA07g37600D | BnaCnng06460D | A0A078INV5 | A0A078H3S0 | Histone H2B; Belongs to the histone H2B family. | Histone H2A; Belongs to the histone H2A family. | 0.850 |
BnaA10g12870D | BnaA04g05330D | A0A078H2F5 | A0A078GCW5 | Histone H2B; Belongs to the histone H2B family. | BnaA04g05330D protein. | 0.916 |
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